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Gene Synthesis> | Codon adaptation index (CAI) for the optimized sequence was determined using "rare codon analysis tool" from GenScript which indicated the overall correlation between codon frequencies in a given coding sequence with highly frequent codons in the host. The CAI values above 0.8 were favorable for optimum expression. Additionally, it was believed that codons with less than 30% frequencies in Pichia pastoriscan hamper the expression. Codon tables for the native and optimized coding sequences for GM-CSF were created by Geneious software (Biomatters, New Zealand) and compared with the codon table for P. pastoris. Restriction sites for XhoI and XbaI were also added to the sequence, followed by adjusting the translation frame for correct expression of GM-CSF with α-factor, c-Myc and HIS tag in the expression vector. The final construct was synthesized by Generay Biotech Co, Ltd. | Get A Quote |
Background and Objectives: Granulocyte-macrophage colony stimulating factor (GM-CSF) is a hematopoietic growth factors involved in proliferation and differentiation of bone marrow precursor cells into granulocytes, monocyte that used in treatment of patient with cancer, therefore, it was decided to express murine GM-CSF as a recombinant protein in Pichia pastoris (P. pastoris). Materials and Methods: The protein sequence of mouse GM-CSF was obtained from Uniprot database and ordered for synthesis after back translation and optimization of coding sequence. It was subsequently cloned into pPICZαA expression vector expressed in Pichia pastoris. Expression and activity of GM-CSF was confirmed by SDS-PAGE, do... More