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Genome-wide identification and expression analysis of glycine-rich RNA-binding protein family in sweet potato wild relative Ipomoea trifida.

Gene. 2019-03; 
LuYan, SunJian, YangZhengmei, ZhaoChenxu, ZhuMingku, MaDaifu, DongTingting, ZhouZhengkun, LiuMeiyan, YangDongjing, LiZongyun, X
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Protein Tools … Total RNA was extracted from these samples using the RNAprep Pure Kit (Tiangen Biotech, Beijing, China) according to the manufacturer's instructions … Subcellular location of ItGRPs was predicted by WoLF PSORT (http://www.genscript.com/psort/wolf_psort.html) … Get A Quote

摘要

Glycine-rich RNA-binding proteins (GRPs) contain RNA recognition motif (RRM) and glycine-rich domains at the N- or C-terminus, respectively, and they participate in varied physiological and biochemical processes, as well as environmental stresses. Sweet potato from the genus Ipomoea is one of the most important crops. However, the role of the GRP gene family in Ipomoea plant species has not been reported yet. At the same time, the genome of sweet potato remains to be elucidated, but the genome of I. trifida which is most probably the progenitor of the sweet potato was released recently. In this regard, we carried out genome-wide analysis of GRP family members in I. trifida. Here, we identified n... More

关键词

Gene expression,Glycine-rich RNA-binding proteins,Ipomoea trifida,Motif distribution,Phylogenetic anal