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The B-independent glycerol dehydratase activating enzyme from Clostridium butyricum cleaves SAM to produce 5'-deoxyadenosine and not 5'-deoxy-5'-(methylthio)adenosine

J Inorg Biochem. 2021-11; 
William G Walls, James D Moody, Elizabeth C McDaniel, Maria Villanueva, Eric M Shepard, William E Broderick, Joan B Broderick
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Codon Optimization … The DNA sequence of Escherichia coli cysteine desulfurase (ecCsdA) was codon optimized and synthesized using a commercial vendor (Genscript) and cloned into a pET-19b vector using the NdeI and BamHI restriction sites. The resulting plasmid was transformed into a BL21(… Get A Quote

摘要

Glycerol dehydratase activating enzyme (GD-AE) is a radical S-adenosyl-l-methionine (SAM) enzyme that installs a catalytically essential amino acid backbone radical onto glycerol dehydratase in bacteria under anaerobic conditions. Although GD-AE is closely homologous to other radical SAM activases that have been shown to cleave the S-C(5') bond of SAM to produce 5'-deoxyadenosine (5'-dAdoH) and methionine, GD-AE from Clostridium butyricum has been reported to instead cleave the S-C(γ) bond of SAM to yield 5'-deoxy-5'-(methylthio)adenosine (MTA). Here we re-investigate the SAM cleavage reaction catalyzed by GD-AE and show that it produces the widely observed 5'-dAdoH, and not the less conventional product MTA.

关键词

5′-deoxy-5′-methylthioadenosine, 5′-deoxyadenosine, AdoMet, Glycerol Dehydratase Activating Enzyme, Glycyl Radical Enzyme Activating Enzyme, Radical SAM, S-adenosyl-L-methionine