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Rational design of antimicrobial peptides targeting Gram-negative bacteria

Comput Biol Chem. 2021-03; 
Loan Huynh, Jeanette Velásquez, Roel Rabara, Supratim Basu, Hau B Nguyen, Goutam Gupta
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Peptide Synthesis … al. (Wiegand et al., 2008). Briefly, bacterial culture was diluted and added to 96-well plates to a final density of 5 × 10 5 cfu/mL with various concentrations of antimicrobial peptide (purchased from GenScript Biotech Corporation, USA) … Get A Quote

摘要

Membrane-targeting host antimicrobial peptides (AMPs) can kill or inhibit the growth of Gram-negative bacteria. However, the evolution of resistance among microbes poses a substantial barrier to the long-term utility of the host AMPs. Combining experiment and molecular dynamics simulations, we show that terminal carboxyl capping enhances both membrane insertion and antibacterial activity of an AMP called P1. Furthermore, we show that a bacterial strain with evolved resistance to this peptide becomes susceptible to P1 variants with either backbone capping or lysine-to-arginine substitutions. Our results suggest that cocktails of closely related AMPs may be useful in overcoming evolved resistance.

关键词

Antimicrobial peptide, Molecular dynamic simulation, Peptide-membrane interactions, Toxicity