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Genome-wide identification and expression analysis of aquaporin gene family related to abiotic stress in watermelon

Genome.. 2019; 
Zhou Y1, Tao J1,2, Ahammed GJ3, Li J1,2, Yang Y1,2.
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Protein Tools … The subcellular localization was predicted using the WoLF PSORT server (https://www.<b>genscript</b>.<br> com/wolf-psort.html). Conserved motifs were identified using the MEME tool (http://meme-suite.<br> org/tools/meme) with the maximum number of motifs set as 15 … Get A Quote

摘要

The plant aquaporins (AQPs) are highly conserved integral membrane proteins that participate in multiple developmental processes and responses to various stresses. In this study, a total of 35 AQP genes were identified in the watermelon genome. The phylogenetic analysis showed that these AQPs can be divided into five types, including 16 plasma membrane intrinsic proteins (PIPs), eight tonoplast intrinsic proteins (TIPs), eight nodulin 26-like intrinsic proteins (NIPs), two small basic intrinsic proteins (SIPs), and one uncategorized X intrinsic protein (XIP). A number of cis-elements related to plant responses to hormones and stresses were detected in the promoter sequences of ClAQP genes. Chromosome distributi... More

关键词

abiotic stress; aquaporin (AQP); aquaporine (AQP); expression profile; gene structure; pastèque; profil d’expression; stress abiotique; structure génique; watermelon